STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fliYFlagellar motor switch protein fliy. (67 aa)    
Predicted Functional Partners:
fliM
Flagellar motor switch protein flim.
 
     0.818
fliN
Flagellar motor switch protein flin, putative; Member of cheC-like PFAM, PF04509.
 
     0.751
HM1_1200
Conserved hypothetical protein.
  
     0.694
HM1_2469
Cell division protein.
  
     0.675
pilZ
Type iv pilus assembly protein pilz.
  
     0.657
HM1_1253
Conserved hypothetical protein.
  
     0.640
fliL
Flagellar basal body-associated protein flil, putative; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family.
       0.613
HM1_2244
GTP-binding signal recognition particle protein, putative.
 
     0.584
flbD
Flagellar protein.
 
     0.564
HM1_2021
Chec-like family protein.
  
     0.530
Your Current Organism:
Heliobacterium modesticaldum
NCBI taxonomy Id: 498761
Other names: H. modesticaldum Ice1, Heliobacterium modesticaldum Ice1, Heliobacterium modesticaldum str. Ice1, Heliobacterium modesticaldum strain Ice1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.