STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HM1_2325Peptidase, m16 family; Belongs to the peptidase M16 family. (421 aa)    
Predicted Functional Partners:
petC
Rieske iron sulfur protein subunit of cytochrome bc complex petc.
   
 0.998
HM1_1028
NADH dehydrogenase conserved domain protein, nuoe and nuof.
   
 
 0.995
petB
Cytochrome b6 subunit of cytochrome bc complex petb; Component of the cytochrome bc complex which donates electrons to the photosynthetic reaction center.
    
 0.989
nuoD
Proton-translocating NADH-ubiquinone oxidoreductase, chain d; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I 49 kDa subunit family.
   
 
 0.946
nuoC
Proton-translocating NADH-ubiquinone oxidoreductase, chain c; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I 30 kDa subunit family.
   
 
 0.931
acpP
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis; Belongs to the acyl carrier protein (ACP) family.
   
 
 0.917
nuoF
Proton-translocating NADH-ubiquinone oxidoreductase, chain f.
   
 
 0.907
nuoB
Proton-translocating NADH-ubiquinone oxidoreductase, chain b; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.
   
 
 0.901
nuoE
Proton-translocating NADH-ubiquinone oxidoreductase, chain e.
   
 
 0.883
HM1_0224
Iron-sulfur cluster-binding protein; Has a 4Fe-4S binding domain. which is similar to a ferredoxin COG. Other protiens with this domain include bacterial ferredoxins, various dehydrogenases, and various reductases.
  
 
 0.864
Your Current Organism:
Heliobacterium modesticaldum
NCBI taxonomy Id: 498761
Other names: H. modesticaldum Ice1, Heliobacterium modesticaldum Ice1, Heliobacterium modesticaldum str. Ice1, Heliobacterium modesticaldum strain Ice1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.