STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HM1_26462fe-2S iron-sulfur cluster binding domain. (155 aa)    
Predicted Functional Partners:
HM1_2647
Dehydrogenase, fad-binding subunit-containing.
 
 0.999
xdhA
Xanthine dehydrogenase molybdenum-binding subunit.
 
 0.999
xdhB
Aldehyde oxidase/xanthine dehydrogenase, putative.
 
 
0.917
adhP
Alcohol dehydrogenase, putative.
 
  
 0.885
HM1_2687
Conserved hypothetical protein.
 
  
 0.850
HM1_2651
Uncharacterized protein ygfk; May contain a pyridine nucleotide-disulfide oxidoreductase domain and a 4Fe-4S binding domain.
 
   
 0.692
HM1_2649
Hypothetical protein.
       0.682
dapE
Succinyl-diaminopimelate desuccinylase, putative.
 
   
 0.612
HM1_2638
Conserved hypothetical protein; Similar to synthase.
 
  
 0.565
hydA
Dihydropyrimidinase.
 
  
 0.552
Your Current Organism:
Heliobacterium modesticaldum
NCBI taxonomy Id: 498761
Other names: H. modesticaldum Ice1, Heliobacterium modesticaldum Ice1, Heliobacterium modesticaldum str. Ice1, Heliobacterium modesticaldum strain Ice1
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.