STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mreCRod shape-determining protein mrec, putative; Involved in formation and maintenance of cell shape. (280 aa)    
Predicted Functional Partners:
HM1_2728
Rod shape-determining protein, putative.
 
 
 0.987
HM1_2727
Peptidoglycan glycosyltransferase.
 
 
 0.976
HM1_2731
Cell shape determining protein, mreb/mrl family.
 
 
 0.974
HM1_1114
Cell shape determining protein, mreb/mrl family, putative.
 
 
 0.973
minC
Septum site-determining protein minc; Cell division inhibitor that blocks the formation of polar Z ring septums. Rapidly oscillates between the poles of the cell to destabilize FtsZ filaments that have formed before they mature into polar Z rings. Prevents FtsZ polymerization; Belongs to the MinC family.
  
  
 0.931
minD
Septum site-determining protein mind.
  
    0.886
radC
DNA repair protein radc; Belongs to the UPF0758 family.
  
  
 0.871
rodA
Rod shape-determining protein roda, putative; Peptidoglycan polymerase that is essential for cell wall elongation; Belongs to the SEDS family. MrdB/RodA subfamily.
 
  
 0.863
HM1_2340
Conserved hypothetical protein.
 
 
 
 0.786
spoVD
Stage v sporulation protein d; Also matches penicillin binding protein transpeptidase domain, PF00905, and penicillin-binding protein dimerisation domain PFAM, PF03717.
 
 
 0.775
Your Current Organism:
Heliobacterium modesticaldum
NCBI taxonomy Id: 498761
Other names: H. modesticaldum Ice1, Heliobacterium modesticaldum Ice1, Heliobacterium modesticaldum str. Ice1, Heliobacterium modesticaldum strain Ice1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.