STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HM1_2873Phage tail tape measure protein, tp901 family, core region, putative. (762 aa)    
Predicted Functional Partners:
HM1_2872
Phage tail component, n-terminal domain, putative.
 
    0.910
HM1_2871
Phage minor structural protein, n-terminal.
 
  
 0.897
HM1_2876
Conserved hypothetical protein.
 
    0.893
HM1_2877
Phage protein, hk97 gp10 family, putative.
 
    0.892
HM1_2878
Phage head-tail adaptor, putative.
 
    0.886
HM1_2874
Conserved hypothetical protein.
 
     0.880
HM1_2875
Phage major tail protein, phi13 family.
 
     0.880
HM1_2867
N-acetylmuramoyl-l-alanine amidase precursor, putative; Member of LysM domain, PF01476.
 
    0.838
HM1_2965
Conserved hypothetical protein.
 
    0.818
HM1_2964
Phage protein, hk97 gp10 family, putative.
 
    0.816
Your Current Organism:
Heliobacterium modesticaldum
NCBI taxonomy Id: 498761
Other names: H. modesticaldum Ice1, Heliobacterium modesticaldum Ice1, Heliobacterium modesticaldum str. Ice1, Heliobacterium modesticaldum strain Ice1
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