STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HM1_2889Conserved hypothetical protein. (224 aa)    
Predicted Functional Partners:
HM1_2887
Conserved hypothetical protein.
 
     0.949
HM1_2891
DNA methylase; Belongs to the N(4)/N(6)-methyltransferase family.
 
  
 0.895
HM1_2890
DNA methylase, family protein; Belongs to the N(4)/N(6)-methyltransferase family.
 
  
 0.886
HM1_2892
Conserved hypothetical protein.
 
     0.879
HM1_2888
Hypothetical protein.
       0.789
HM1_2950
Conserved hypothetical protein.
 
     0.764
HM1_0607
Hypothetical protein.
  
     0.743
HM1_2884
Conserved hypothetical protein.
 
    0.743
HM1_2897
Conserved hypothetical protein.
 
    0.733
HM1_0600
Conserved hypothetical protein.
 
    0.718
Your Current Organism:
Heliobacterium modesticaldum
NCBI taxonomy Id: 498761
Other names: H. modesticaldum Ice1, Heliobacterium modesticaldum Ice1, Heliobacterium modesticaldum str. Ice1, Heliobacterium modesticaldum strain Ice1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.