Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
TO73_0130 | TO73_1152 | TO73_0130 | TO73_1152 | Lactate 2-monooxygenase. | Soluble hydrogenase, small subunit. | 0.438 |
TO73_0953 | TO73_1152 | TO73_0953 | TO73_1152 | D-3-phosphoglycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | Soluble hydrogenase, small subunit. | 0.423 |
TO73_1152 | TO73_0130 | TO73_1152 | TO73_0130 | Soluble hydrogenase, small subunit. | Lactate 2-monooxygenase. | 0.438 |
TO73_1152 | TO73_0953 | TO73_1152 | TO73_0953 | Soluble hydrogenase, small subunit. | D-3-phosphoglycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | 0.423 |
TO73_1152 | TO73_1153 | TO73_1152 | TO73_1153 | Soluble hydrogenase, small subunit. | Hypothetical protein. | 0.569 |
TO73_1152 | TO73_1457 | TO73_1152 | TO73_1457 | Soluble hydrogenase, small subunit. | Phosphoribosylamine--glycine ligase. | 0.534 |
TO73_1152 | TO73_1958 | TO73_1152 | TO73_1958 | Soluble hydrogenase, small subunit. | Glutamate synthase [NADPH] large chain. | 0.497 |
TO73_1152 | alaS | TO73_1152 | TO73_0301 | Soluble hydrogenase, small subunit. | alanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain. | 0.540 |
TO73_1152 | fni | TO73_1152 | TO73_1256 | Soluble hydrogenase, small subunit. | Isopentenyl-diphosphate delta-isomerase, FMN-dependent; Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP). | 0.438 |
TO73_1153 | TO73_1152 | TO73_1153 | TO73_1152 | Hypothetical protein. | Soluble hydrogenase, small subunit. | 0.569 |
TO73_1457 | TO73_1152 | TO73_1457 | TO73_1152 | Phosphoribosylamine--glycine ligase. | Soluble hydrogenase, small subunit. | 0.534 |
TO73_1457 | alaS | TO73_1457 | TO73_0301 | Phosphoribosylamine--glycine ligase. | alanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain. | 0.406 |
TO73_1958 | TO73_1152 | TO73_1958 | TO73_1152 | Glutamate synthase [NADPH] large chain. | Soluble hydrogenase, small subunit. | 0.497 |
alaS | TO73_1152 | TO73_0301 | TO73_1152 | alanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain. | Soluble hydrogenase, small subunit. | 0.540 |
alaS | TO73_1457 | TO73_0301 | TO73_1457 | alanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain. | Phosphoribosylamine--glycine ligase. | 0.406 |
fni | TO73_1152 | TO73_1256 | TO73_1152 | Isopentenyl-diphosphate delta-isomerase, FMN-dependent; Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP). | Soluble hydrogenase, small subunit. | 0.438 |