STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TO73_2178TRAP dicarboxylate transporter, DctM subunit, unknown substrate 6. (497 aa)    
Predicted Functional Partners:
TO73_2177
TRAP dicarboxylate transporter, DctQ subunit, unknown substrate 6.
 
    0.953
TO73_1040
TRAP transporter solute receptor, unknown substrate 6; Part of the tripartite ATP-independent periplasmic (TRAP) transport system.
  
    0.778
TO73_2179
TRAP transporter solute receptor, unknown substrate 6; Part of the tripartite ATP-independent periplasmic (TRAP) transport system.
  
    0.778
TO73_2176
Permease.
  
    0.548
TO73_2175
Universal stress protein family.
       0.539
Your Current Organism:
Thermus aquaticus
NCBI taxonomy Id: 498848
Other names: T. aquaticus Y51MC23, Thermus aquaticus Y51MC23, Thermus aquaticus str. Y51MC23, Thermus aquaticus strain Y51MC23
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.