STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ANI90932.1AB hydrolase superfamily protein YfhM. (289 aa)    
Predicted Functional Partners:
ANI90933.1
Putative methyltransferase OB1106.
  
  
 0.601
ANI90934.1
Hypothetical protein.
  
    0.572
ANI92151.1
Pyridine nucleotide-disulfide oxidoreductase domain-containing protein 2.
  
  
 0.547
ANI92793.1
Putative periplasmic serine endoprotease DegP-like.
 
 
 0.542
ANI91331.1
Serine protease.
   
 0.489
ANI90931.1
Hypothetical protein.
  
    0.483
ANI90930.1
Membrane protein YdfJ.
       0.478
ANI93039.1
Putative periplasmic serine endoprotease DegP-like.
   
 0.477
ANI91761.1
Pentalenene oxygenase; Belongs to the cytochrome P450 family.
 
 
 0.469
ANI93833.1
FAD-containing monooxygenase EthA.
  
 
 0.459
Your Current Organism:
Dietzia timorensis
NCBI taxonomy Id: 499555
Other names: BTCC B-560, D. timorensis, Dietzia timorensis Yamamura et al. 2010, NBRC 104184, strain ID05-A0528
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.