STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ANI91089.1Uncharacterized protein YcaQ. (394 aa)    
Predicted Functional Partners:
ANI91088.1
O-antigen export system permease protein RfbD.
       0.517
ANI93088.1
Dihydrofolate reductase; Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis.
  
  
 0.501
ANI91085.1
Hypothetical protein.
       0.489
ANI91086.1
Galactofuranosyl transferase GlfT1.
       0.489
ANI91087.1
O-antigen export system ATP-binding protein RfbE.
       0.489
ANI93644.1
Redox-sensitive transcriptional activator SoxR.
  
     0.477
ANI92845.1
Uncharacterized protein.
  
     0.447
Your Current Organism:
Dietzia timorensis
NCBI taxonomy Id: 499555
Other names: BTCC B-560, D. timorensis, Dietzia timorensis Yamamura et al. 2010, NBRC 104184, strain ID05-A0528
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.