STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ANI91110.1Uncharacterized protein YeeC. (387 aa)    
Predicted Functional Partners:
ANI91109.1
Putative ATP-dependent helicase YeeB.
 
  
 0.967
ANI91108.1
Putative DNA methyltransferase YeeA.
 
   
 0.946
ANI91105.1
Hypothetical protein.
  
  
 0.622
ANI91254.1
Putative uncharacterized protein YagJ.
 
  
 0.621
ANI91107.1
TMV resistance protein N.
       0.550
ANI91106.1
Hypothetical protein.
       0.549
ANI92907.1
5-methylcytosine-specific restriction enzyme B.
  
  
 0.501
ANI91111.1
Hypothetical protein.
       0.499
ANI91635.1
Putative DNA repair helicase RAD25-like protein.
  
  
 0.468
ANI92326.1
Uncharacterized protein.
  
  
 0.468
Your Current Organism:
Dietzia timorensis
NCBI taxonomy Id: 499555
Other names: BTCC B-560, D. timorensis, Dietzia timorensis Yamamura et al. 2010, NBRC 104184, strain ID05-A0528
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.