Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ANI91273.1 | ANI91824.1 | BJL86_0466 | BJL86_1031 | Prephenate dehydrogenase. | Hypothetical protein. | 0.848 |
ANI91273.1 | ANI92076.1 | BJL86_0466 | BJL86_1294 | Prephenate dehydrogenase. | Putative aminotransferase. | 0.958 |
ANI91273.1 | ANI92901.1 | BJL86_0466 | BJL86_2134 | Prephenate dehydrogenase. | Phospho-2-dehydro-3-deoxyheptonate aldolase; Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D-arabino- heptulosonate-7-phosphate (DAHP). | 0.838 |
ANI91273.1 | ANI93073.1 | BJL86_0466 | BJL86_2309 | Prephenate dehydrogenase. | Uncharacterized protein. | 0.959 |
ANI91273.1 | aroA | BJL86_0466 | BJL86_1039 | Prephenate dehydrogenase. | 3-phosphoshikimate 1-carboxyvinyltransferase; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate. | 0.835 |
ANI91273.1 | aroB | BJL86_0466 | BJL86_1732 | Prephenate dehydrogenase. | 3-dehydroquinate synthase; Catalyzes the conversion of 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ). | 0.848 |
ANI91273.1 | aroC | BJL86_0466 | BJL86_1734 | Prephenate dehydrogenase. | Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | 0.909 |
ANI91273.1 | hisC | BJL86_0466 | BJL86_1426 | Prephenate dehydrogenase. | Histidinol-phosphate aminotransferase; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily. | 0.958 |
ANI91273.1 | pat | BJL86_0466 | BJL86_0435 | Prephenate dehydrogenase. | Putative phenylalanine aminotransferase; May catalyze the transamination reaction in phenylalanine biosynthesis; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. | 0.958 |
ANI91273.1 | pheA | BJL86_0466 | BJL86_0214 | Prephenate dehydrogenase. | Prephenate dehydratase. | 0.987 |
ANI91824.1 | ANI91273.1 | BJL86_1031 | BJL86_0466 | Hypothetical protein. | Prephenate dehydrogenase. | 0.848 |
ANI92076.1 | ANI91273.1 | BJL86_1294 | BJL86_0466 | Putative aminotransferase. | Prephenate dehydrogenase. | 0.958 |
ANI92076.1 | aroA | BJL86_1294 | BJL86_1039 | Putative aminotransferase. | 3-phosphoshikimate 1-carboxyvinyltransferase; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate. | 0.476 |
ANI92076.1 | aroB | BJL86_1294 | BJL86_1732 | Putative aminotransferase. | 3-dehydroquinate synthase; Catalyzes the conversion of 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ). | 0.479 |
ANI92076.1 | aroC | BJL86_1294 | BJL86_1734 | Putative aminotransferase. | Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | 0.571 |
ANI92076.1 | hisC | BJL86_1294 | BJL86_1426 | Putative aminotransferase. | Histidinol-phosphate aminotransferase; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily. | 0.916 |
ANI92076.1 | pat | BJL86_1294 | BJL86_0435 | Putative aminotransferase. | Putative phenylalanine aminotransferase; May catalyze the transamination reaction in phenylalanine biosynthesis; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. | 0.917 |
ANI92076.1 | pheA | BJL86_1294 | BJL86_0214 | Putative aminotransferase. | Prephenate dehydratase. | 0.913 |
ANI92901.1 | ANI91273.1 | BJL86_2134 | BJL86_0466 | Phospho-2-dehydro-3-deoxyheptonate aldolase; Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D-arabino- heptulosonate-7-phosphate (DAHP). | Prephenate dehydrogenase. | 0.838 |
ANI92901.1 | ANI93073.1 | BJL86_2134 | BJL86_2309 | Phospho-2-dehydro-3-deoxyheptonate aldolase; Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D-arabino- heptulosonate-7-phosphate (DAHP). | Uncharacterized protein. | 0.590 |
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