STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ANI91532.1Carnitinyl-CoA dehydratase. (263 aa)    
Predicted Functional Partners:
ANI91531.1
Putative CoA-transferase subunit alpha.
 
  
 0.991
ANI91530.1
Putative CoA-transferase subunit beta.
 
 
 0.989
ANI91533.1
Tropinone reductase 2.
 
 0.979
ANI91529.1
Nitronate monooxygenase.
 
  
 0.973
ANI91242.1
Glutaryl-CoA dehydrogenase, mitochondrial.
  
 0.959
ANI93059.1
Putative acyl-CoA dehydrogenase YngJ.
  
 0.959
ANI91315.1
Acyl-coenzyme A oxidase, peroxisomal.
  
 0.958
ANI92684.1
1,2-epoxyphenylacetyl-CoA isomerase.
 
  
0.934
ANI93061.1
Methylcrotonoyl-CoA carboxylase beta chain, mitochondrial.
  
 0.933
ANI93853.1
Uncharacterized protein.
 
 0.909
Your Current Organism:
Dietzia timorensis
NCBI taxonomy Id: 499555
Other names: BTCC B-560, D. timorensis, Dietzia timorensis Yamamura et al. 2010, NBRC 104184, strain ID05-A0528
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.