Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ANI91735.1 | ANI91736.1 | BJL86_0942 | BJL86_0943 | ATP-dependent DNA helicase PIF1. | Putative antitoxin VapB29. | 0.546 |
ANI91735.1 | vapC-2 | BJL86_0942 | BJL86_0944 | ATP-dependent DNA helicase PIF1. | Putative ribonuclease VapC29; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family. | 0.598 |
ANI91736.1 | ANI91735.1 | BJL86_0943 | BJL86_0942 | Putative antitoxin VapB29. | ATP-dependent DNA helicase PIF1. | 0.546 |
ANI91736.1 | ANI91738.1 | BJL86_0943 | BJL86_0945 | Putative antitoxin VapB29. | S-(hydroxymethyl)mycothiol dehydrogenase. | 0.450 |
ANI91736.1 | vapC-2 | BJL86_0943 | BJL86_0944 | Putative antitoxin VapB29. | Putative ribonuclease VapC29; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family. | 0.853 |
ANI91738.1 | ANI91736.1 | BJL86_0945 | BJL86_0943 | S-(hydroxymethyl)mycothiol dehydrogenase. | Putative antitoxin VapB29. | 0.450 |
ANI91738.1 | vapC-2 | BJL86_0945 | BJL86_0944 | S-(hydroxymethyl)mycothiol dehydrogenase. | Putative ribonuclease VapC29; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family. | 0.450 |
ANI92859.1 | vapC-2 | BJL86_2092 | BJL86_0944 | Plasmid stability protein StbC. | Putative ribonuclease VapC29; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family. | 0.424 |
vapC-2 | ANI91735.1 | BJL86_0944 | BJL86_0942 | Putative ribonuclease VapC29; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family. | ATP-dependent DNA helicase PIF1. | 0.598 |
vapC-2 | ANI91736.1 | BJL86_0944 | BJL86_0943 | Putative ribonuclease VapC29; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family. | Putative antitoxin VapB29. | 0.853 |
vapC-2 | ANI91738.1 | BJL86_0944 | BJL86_0945 | Putative ribonuclease VapC29; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family. | S-(hydroxymethyl)mycothiol dehydrogenase. | 0.450 |
vapC-2 | ANI92859.1 | BJL86_0944 | BJL86_2092 | Putative ribonuclease VapC29; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family. | Plasmid stability protein StbC. | 0.424 |