Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ANI91705.1 | ANI91870.1 | BJL86_0912 | BJL86_1078 | Uncharacterized protein. | Putative MscS family protein YkuT. | 0.456 |
ANI91868.1 | ANI91870.1 | BJL86_1076 | BJL86_1078 | Inositol-1-monophosphatase. | Putative MscS family protein YkuT. | 0.401 |
ANI91868.1 | prfB | BJL86_1076 | BJL86_1077 | Inositol-1-monophosphatase. | Peptide chain release factor 2; Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA. | 0.692 |
ANI91868.1 | smpB | BJL86_1076 | BJL86_1080 | Inositol-1-monophosphatase. | SsrA-binding protein; Required for rescue of stalled ribosomes mediated by trans- translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene; the 2 termini fold to resemble tRNA(Ala) and it encodes a 'tag peptide', a short internal open reading frame. During trans-translation Ala-aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to [...] | 0.500 |
ANI91870.1 | ANI91705.1 | BJL86_1078 | BJL86_0912 | Putative MscS family protein YkuT. | Uncharacterized protein. | 0.456 |
ANI91870.1 | ANI91868.1 | BJL86_1078 | BJL86_1076 | Putative MscS family protein YkuT. | Inositol-1-monophosphatase. | 0.401 |
ANI91870.1 | ANI91871.1 | BJL86_1078 | BJL86_1079 | Putative MscS family protein YkuT. | Hypothetical protein. | 0.761 |
ANI91870.1 | ANI91873.1 | BJL86_1078 | BJL86_1081 | Putative MscS family protein YkuT. | Putative ATP-dependent DNA helicase RecQ. | 0.531 |
ANI91870.1 | ANI91874.1 | BJL86_1078 | BJL86_1082 | Putative MscS family protein YkuT. | Reticulon-4-interacting protein 1, mitochondrial. | 0.483 |
ANI91870.1 | ANI92716.1 | BJL86_1078 | BJL86_1948 | Putative MscS family protein YkuT. | Acetolactate synthase large subunit IlvB1. | 0.466 |
ANI91870.1 | gcvP | BJL86_1078 | BJL86_1531 | Putative MscS family protein YkuT. | Glycine dehydrogenase [decarboxylating]; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. | 0.567 |
ANI91870.1 | mscL | BJL86_1078 | BJL86_2268 | Putative MscS family protein YkuT. | Large-conductance mechanosensitive channel; Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell. | 0.448 |
ANI91870.1 | prfB | BJL86_1078 | BJL86_1077 | Putative MscS family protein YkuT. | Peptide chain release factor 2; Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA. | 0.676 |
ANI91870.1 | smpB | BJL86_1078 | BJL86_1080 | Putative MscS family protein YkuT. | SsrA-binding protein; Required for rescue of stalled ribosomes mediated by trans- translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene; the 2 termini fold to resemble tRNA(Ala) and it encodes a 'tag peptide', a short internal open reading frame. During trans-translation Ala-aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to [...] | 0.630 |
ANI91871.1 | ANI91870.1 | BJL86_1079 | BJL86_1078 | Hypothetical protein. | Putative MscS family protein YkuT. | 0.761 |
ANI91871.1 | ANI91873.1 | BJL86_1079 | BJL86_1081 | Hypothetical protein. | Putative ATP-dependent DNA helicase RecQ. | 0.531 |
ANI91871.1 | ANI91874.1 | BJL86_1079 | BJL86_1082 | Hypothetical protein. | Reticulon-4-interacting protein 1, mitochondrial. | 0.481 |
ANI91871.1 | prfB | BJL86_1079 | BJL86_1077 | Hypothetical protein. | Peptide chain release factor 2; Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA. | 0.541 |
ANI91871.1 | smpB | BJL86_1079 | BJL86_1080 | Hypothetical protein. | SsrA-binding protein; Required for rescue of stalled ribosomes mediated by trans- translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene; the 2 termini fold to resemble tRNA(Ala) and it encodes a 'tag peptide', a short internal open reading frame. During trans-translation Ala-aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to [...] | 0.531 |
ANI91873.1 | ANI91870.1 | BJL86_1081 | BJL86_1078 | Putative ATP-dependent DNA helicase RecQ. | Putative MscS family protein YkuT. | 0.531 |
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