STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ANI91986.1Transcriptional regulatory protein LiaR. (948 aa)    
Predicted Functional Partners:
ANI91988.1
Toluate 1,2-dioxygenase electron transfer component.
 
     0.957
ANI91987.1
1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
   
 0.956
ANI91989.1
Toluate 1,2-dioxygenase subunit beta.
 
    0.923
ANI91985.1
Inner membrane protein YdcO.
 
     0.908
ANI91990.1
Benzoate 1,2-dioxygenase subunit alpha.
 
    0.860
ANI91993.1
Muconolactone Delta-isomerase.
 
     0.627
ANI91991.1
Catechol 1,2-dioxygenase.
  
     0.615
ANI92517.1
Ectonucleotide pyrophosphatase/phosphodiesterase family member 4.
  
     0.457
ANI91169.1
3-phenylpropionate/cinnamic acid dioxygenase subuni t alpha.
 
    0.448
ANI94103.1
Benzoate transport protein.
 
    0.434
Your Current Organism:
Dietzia timorensis
NCBI taxonomy Id: 499555
Other names: BTCC B-560, D. timorensis, Dietzia timorensis Yamamura et al. 2010, NBRC 104184, strain ID05-A0528
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