Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ANI91928.1 | ANI92013.1 | BJL86_1138 | BJL86_1228 | Hypothetical protein. | ATP-dependent Clp protease ATP-binding subunit ClpL. | 0.777 |
ANI92010.1 | ANI92011.1 | BJL86_1225 | BJL86_1226 | NAD-dependent protein deacetylase 1. | KsdD-like steroid dehydrogenase. | 0.539 |
ANI92010.1 | ANI92013.1 | BJL86_1225 | BJL86_1228 | NAD-dependent protein deacetylase 1. | ATP-dependent Clp protease ATP-binding subunit ClpL. | 0.413 |
ANI92010.1 | nadD | BJL86_1225 | BJL86_1230 | NAD-dependent protein deacetylase 1. | Putative nicotinate-nucleotide adenylyltransferase; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD). | 0.467 |
ANI92010.1 | proA | BJL86_1225 | BJL86_1227 | NAD-dependent protein deacetylase 1. | Gamma-glutamyl phosphate reductase; Catalyzes the NADPH-dependent reduction of L-glutamate 5- phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5-carboxylate. Belongs to the gamma-glutamyl phosphate reductase family. | 0.433 |
ANI92011.1 | ANI92010.1 | BJL86_1226 | BJL86_1225 | KsdD-like steroid dehydrogenase. | NAD-dependent protein deacetylase 1. | 0.539 |
ANI92011.1 | ANI92013.1 | BJL86_1226 | BJL86_1228 | KsdD-like steroid dehydrogenase. | ATP-dependent Clp protease ATP-binding subunit ClpL. | 0.485 |
ANI92011.1 | ANI92014.1 | BJL86_1226 | BJL86_1229 | KsdD-like steroid dehydrogenase. | Hypothetical protein. | 0.425 |
ANI92011.1 | proA | BJL86_1226 | BJL86_1227 | KsdD-like steroid dehydrogenase. | Gamma-glutamyl phosphate reductase; Catalyzes the NADPH-dependent reduction of L-glutamate 5- phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5-carboxylate. Belongs to the gamma-glutamyl phosphate reductase family. | 0.578 |
ANI92013.1 | ANI91928.1 | BJL86_1228 | BJL86_1138 | ATP-dependent Clp protease ATP-binding subunit ClpL. | Hypothetical protein. | 0.777 |
ANI92013.1 | ANI92010.1 | BJL86_1228 | BJL86_1225 | ATP-dependent Clp protease ATP-binding subunit ClpL. | NAD-dependent protein deacetylase 1. | 0.413 |
ANI92013.1 | ANI92011.1 | BJL86_1228 | BJL86_1226 | ATP-dependent Clp protease ATP-binding subunit ClpL. | KsdD-like steroid dehydrogenase. | 0.485 |
ANI92013.1 | ANI92014.1 | BJL86_1228 | BJL86_1229 | ATP-dependent Clp protease ATP-binding subunit ClpL. | Hypothetical protein. | 0.949 |
ANI92013.1 | ANI92017.1 | BJL86_1228 | BJL86_1232 | ATP-dependent Clp protease ATP-binding subunit ClpL. | Glucosyl-3-phosphoglycerate phosphatase. | 0.637 |
ANI92013.1 | ANI92018.1 | BJL86_1228 | BJL86_1233 | ATP-dependent Clp protease ATP-binding subunit ClpL. | DegV domain-containing protein. | 0.638 |
ANI92013.1 | ANI92019.1 | BJL86_1228 | BJL86_1234 | ATP-dependent Clp protease ATP-binding subunit ClpL. | ComE operon protein 1. | 0.457 |
ANI92013.1 | nadD | BJL86_1228 | BJL86_1230 | ATP-dependent Clp protease ATP-binding subunit ClpL. | Putative nicotinate-nucleotide adenylyltransferase; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD). | 0.710 |
ANI92013.1 | proA | BJL86_1228 | BJL86_1227 | ATP-dependent Clp protease ATP-binding subunit ClpL. | Gamma-glutamyl phosphate reductase; Catalyzes the NADPH-dependent reduction of L-glutamate 5- phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5-carboxylate. Belongs to the gamma-glutamyl phosphate reductase family. | 0.755 |
ANI92013.1 | rsfS | BJL86_1228 | BJL86_1231 | ATP-dependent Clp protease ATP-binding subunit ClpL. | Ribosomal silencing factor RsfS; Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation. | 0.745 |
ANI92014.1 | ANI92011.1 | BJL86_1229 | BJL86_1226 | Hypothetical protein. | KsdD-like steroid dehydrogenase. | 0.425 |
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