Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ANI92037.1 | ANI92038.1 | BJL86_1252 | BJL86_1253 | Ribosomal RNA small subunit methyltransferase E; Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit. | PhoH-like protein. | 0.653 |
ANI92037.1 | ANI92040.1 | BJL86_1252 | BJL86_1255 | Ribosomal RNA small subunit methyltransferase E; Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit. | UPF0053 protein. | 0.584 |
ANI92037.1 | ANI92043.1 | BJL86_1252 | BJL86_1258 | Ribosomal RNA small subunit methyltransferase E; Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit. | Isoprenyl transferase 2; Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids. | 0.549 |
ANI92037.1 | dnaJ | BJL86_1252 | BJL86_1251 | Ribosomal RNA small subunit methyltransferase E; Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit. | Chaperone protein DnaJ 1; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, [...] | 0.858 |
ANI92037.1 | era | BJL86_1252 | BJL86_1256 | Ribosomal RNA small subunit methyltransferase E; Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit. | GTPase Era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism. | 0.584 |
ANI92037.1 | recO | BJL86_1252 | BJL86_1257 | Ribosomal RNA small subunit methyltransferase E; Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit. | DNA repair protein RecO; Involved in DNA repair and RecF pathway recombination. | 0.645 |
ANI92037.1 | ybeY | BJL86_1252 | BJL86_1254 | Ribosomal RNA small subunit methyltransferase E; Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit. | Endoribonuclease YbeY; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA. | 0.594 |
ANI92038.1 | ANI92037.1 | BJL86_1253 | BJL86_1252 | PhoH-like protein. | Ribosomal RNA small subunit methyltransferase E; Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit. | 0.653 |
ANI92038.1 | ANI92040.1 | BJL86_1253 | BJL86_1255 | PhoH-like protein. | UPF0053 protein. | 0.791 |
ANI92038.1 | ANI92043.1 | BJL86_1253 | BJL86_1258 | PhoH-like protein. | Isoprenyl transferase 2; Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids. | 0.592 |
ANI92038.1 | ANI92347.1 | BJL86_1253 | BJL86_1570 | PhoH-like protein. | UPF0053 protein. | 0.556 |
ANI92038.1 | cmk | BJL86_1253 | BJL86_1505 | PhoH-like protein. | Cytidylate kinase. | 0.601 |
ANI92038.1 | dnaJ | BJL86_1253 | BJL86_1251 | PhoH-like protein. | Chaperone protein DnaJ 1; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, [...] | 0.618 |
ANI92038.1 | era | BJL86_1253 | BJL86_1256 | PhoH-like protein. | GTPase Era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism. | 0.873 |
ANI92038.1 | recO | BJL86_1253 | BJL86_1257 | PhoH-like protein. | DNA repair protein RecO; Involved in DNA repair and RecF pathway recombination. | 0.859 |
ANI92038.1 | tadA | BJL86_1253 | BJL86_0468 | PhoH-like protein. | tRNA-specific adenosine deaminase; Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2); Belongs to the cytidine and deoxycytidylate deaminase family. | 0.536 |
ANI92038.1 | ybeY | BJL86_1253 | BJL86_1254 | PhoH-like protein. | Endoribonuclease YbeY; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA. | 0.970 |
ANI92040.1 | ANI92037.1 | BJL86_1255 | BJL86_1252 | UPF0053 protein. | Ribosomal RNA small subunit methyltransferase E; Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit. | 0.584 |
ANI92040.1 | ANI92038.1 | BJL86_1255 | BJL86_1253 | UPF0053 protein. | PhoH-like protein. | 0.791 |
ANI92040.1 | ANI92043.1 | BJL86_1255 | BJL86_1258 | UPF0053 protein. | Isoprenyl transferase 2; Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids. | 0.674 |
page 1 of 4