STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ANI92227.1Hypothetical protein. (490 aa)    
Predicted Functional Partners:
ANI92228.1
UPF0699 transmembrane protein YdbS.
 
  
 0.973
ANI92229.1
Putative oxidoreductase YkpB; Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid.
       0.554
ANI92232.1
Lipid A export ATP-binding/permease protein MsbA.
 
     0.528
ANI92812.1
Hypothetical protein.
  
  
 0.526
ANI92231.1
Multidrug resistance-like ATP-binding protein MdlA.
 
     0.481
ANI91804.1
Hypothetical protein.
  
  
 0.472
ANI92387.1
Aerobic cobaltochelatase subunit CobN.
  
    0.445
ANI91605.1
Putative metal chaperone YciC.
  
    0.443
ANI91350.1
Hypothetical protein.
  
    0.437
ANI92786.1
Hypothetical protein.
  
    0.437
Your Current Organism:
Dietzia timorensis
NCBI taxonomy Id: 499555
Other names: BTCC B-560, D. timorensis, Dietzia timorensis Yamamura et al. 2010, NBRC 104184, strain ID05-A0528
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.