STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ANI92239.1Nopaline permease ATP-binding protein P. (259 aa)    
Predicted Functional Partners:
ANI92238.1
Putative amino-acid ABC transporter permease protein n YckA.
 
 0.992
ANI92237.1
Glutamine-binding periplasmic protein; Belongs to the bacterial solute-binding protein 3 family.
 
 
 0.965
ANI92974.1
Glutamate transport system permease protein GluD.
 
 0.939
ANI92973.1
Glutamate transport system permease protein GluC.
 
 
 0.936
ANI93766.1
Putative amino-acid ABC transporter permease protein n y4tF.
 
 
 0.917
ANI93767.1
Putative amino-acid ABC transporter permease protein n y4tG.
 
 
 0.917
ANI93608.1
ABC transporter glutamine-binding protein GlnH.
 
 
 0.883
ANI92972.1
Glutamate-binding protein.
 
 
 0.880
ANI91971.1
Lipid A export ATP-binding/permease protein MsbA.
     
0.879
ANI92232.1
Lipid A export ATP-binding/permease protein MsbA.
    
0.873
Your Current Organism:
Dietzia timorensis
NCBI taxonomy Id: 499555
Other names: BTCC B-560, D. timorensis, Dietzia timorensis Yamamura et al. 2010, NBRC 104184, strain ID05-A0528
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