STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ANI92417.1Isoniazid-inducible protein IniC. (472 aa)    
Predicted Functional Partners:
ANI92416.1
Uncharacterized protein in xynA 3'region.
 
     0.953
gpsA
Glycerol-3-phosphate dehydrogenase [NAD(P)+] 2; Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family.
  
  
 0.709
ANI91260.1
Hypothetical protein.
  
  
 0.642
dnaG
DNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. Belongs to the DnaG primase family.
  
  
 0.642
ANI93079.1
Chaperone protein DnaK; Belongs to the heat shock protein 70 family.
 
  
 0.596
ANI91922.1
Putative lipoprotein LprD.
  
     0.590
ANI92817.1
GTP-binding protein TypA/BipA-like protein.
  
  
 0.577
cmk
Cytidylate kinase.
  
  
 0.573
ANI92573.1
35 kDa protein.
  
    0.559
ANI92453.1
HTH-type transcriptional repressor AcnR.
  
    0.555
Your Current Organism:
Dietzia timorensis
NCBI taxonomy Id: 499555
Other names: BTCC B-560, D. timorensis, Dietzia timorensis Yamamura et al. 2010, NBRC 104184, strain ID05-A0528
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