Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ANI91029.1 | ANI92555.1 | BJL86_0218 | BJL86_1784 | Putative ankyrin repeat protein. | Putative amino acid permease YdaO. | 0.481 |
ANI91029.1 | ANI92558.1 | BJL86_0218 | BJL86_1787 | Putative ankyrin repeat protein. | ATP-dependent RNA helicase HrpA. | 0.640 |
ANI91437.1 | ANI92555.1 | BJL86_0635 | BJL86_1784 | Uncharacterized protein. | Putative amino acid permease YdaO. | 0.481 |
ANI91437.1 | ANI92558.1 | BJL86_0635 | BJL86_1787 | Uncharacterized protein. | ATP-dependent RNA helicase HrpA. | 0.640 |
ANI91960.1 | ANI92555.1 | BJL86_1173 | BJL86_1784 | Oligo-1,6-glucosidase. | Putative amino acid permease YdaO. | 0.748 |
ANI91960.1 | ANI93345.1 | BJL86_1173 | BJL86_2585 | Oligo-1,6-glucosidase. | Oligo-1,6-glucosidase. | 0.921 |
ANI92340.1 | ANI92555.1 | BJL86_1563 | BJL86_1784 | Hypothetical protein. | Putative amino acid permease YdaO. | 0.707 |
ANI92340.1 | ANI92556.1 | BJL86_1563 | BJL86_1785 | Hypothetical protein. | Trk system potassium uptake protein TrkA. | 0.629 |
ANI92340.1 | ANI92557.1 | BJL86_1563 | BJL86_1786 | Hypothetical protein. | Trk system potassium uptake protein TrkA. | 0.692 |
ANI92554.1 | ANI92555.1 | BJL86_1783 | BJL86_1784 | Putative RNA methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family. | Putative amino acid permease YdaO. | 0.850 |
ANI92554.1 | ANI92556.1 | BJL86_1783 | BJL86_1785 | Putative RNA methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family. | Trk system potassium uptake protein TrkA. | 0.679 |
ANI92554.1 | ANI92557.1 | BJL86_1783 | BJL86_1786 | Putative RNA methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family. | Trk system potassium uptake protein TrkA. | 0.683 |
ANI92554.1 | ANI92558.1 | BJL86_1783 | BJL86_1787 | Putative RNA methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family. | ATP-dependent RNA helicase HrpA. | 0.643 |
ANI92554.1 | dxs | BJL86_1783 | BJL86_1782 | Putative RNA methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family. | 1-deoxy-D-xylulose-5-phosphate synthase; Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D- xylulose-5-phosphate (DXP); Belongs to the transketolase family. DXPS subfamily. | 0.682 |
ANI92555.1 | ANI91029.1 | BJL86_1784 | BJL86_0218 | Putative amino acid permease YdaO. | Putative ankyrin repeat protein. | 0.481 |
ANI92555.1 | ANI91437.1 | BJL86_1784 | BJL86_0635 | Putative amino acid permease YdaO. | Uncharacterized protein. | 0.481 |
ANI92555.1 | ANI91960.1 | BJL86_1784 | BJL86_1173 | Putative amino acid permease YdaO. | Oligo-1,6-glucosidase. | 0.748 |
ANI92555.1 | ANI92340.1 | BJL86_1784 | BJL86_1563 | Putative amino acid permease YdaO. | Hypothetical protein. | 0.707 |
ANI92555.1 | ANI92554.1 | BJL86_1784 | BJL86_1783 | Putative amino acid permease YdaO. | Putative RNA methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family. | 0.850 |
ANI92555.1 | ANI92556.1 | BJL86_1784 | BJL86_1785 | Putative amino acid permease YdaO. | Trk system potassium uptake protein TrkA. | 0.858 |
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