STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ANI92730.1Protein PhnB. (140 aa)    
Predicted Functional Partners:
ANI91308.1
Hypothetical protein.
 
  
 0.700
ANI92729.1
DNA polymerase III PolC-type.
       0.513
cobB
NAD-dependent protein deacylase 2; Belongs to the sirtuin family. Class III subfamily.
  
    0.433
ANI92010.1
NAD-dependent protein deacetylase 1.
  
    0.433
ANI91494.1
Putative HTH-type transcriptional regulator YobV.
 
   
 0.431
ANI91943.1
Transcriptional repressor SdpR.
 
    0.404
Your Current Organism:
Dietzia timorensis
NCBI taxonomy Id: 499555
Other names: BTCC B-560, D. timorensis, Dietzia timorensis Yamamura et al. 2010, NBRC 104184, strain ID05-A0528
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.