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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ANI93189.1Putative HTH-type transcriptional regulator. (212 aa)    
Predicted Functional Partners:
ANI93196.1
Uncharacterized protein.
 
     0.866
ANI93190.1
3-hydroxypropionyl-coenzyme A dehydratase.
  
    0.844
ANI93195.1
Hypothetical protein.
 
     0.768
ANI93191.1
Acyl-CoA dehydrogenase fadE12.
 
     0.752
ANI91021.1
Transcriptional regulator LytR.
   
    0.653
ANI93192.1
Methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial.
   
 
 0.608
ANI93194.1
Putative acyl-CoA dehydrogenase YngJ.
 
     0.604
ANI93193.1
Methylcrotonoyl-CoA carboxylase beta chain, mitochondrial.
     
 0.585
ANI92968.1
Lysine export transcriptional regulatory protein Ly sG; Belongs to the LysR transcriptional regulatory family.
   
   0.576
ANI93378.1
Putative HTH-type transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
   
   0.575
Your Current Organism:
Dietzia timorensis
NCBI taxonomy Id: 499555
Other names: BTCC B-560, D. timorensis, Dietzia timorensis Yamamura et al. 2010, NBRC 104184, strain ID05-A0528
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