KWV95947.1 protein (Erythrobacter sp. AP23) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

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a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

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textmining

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co-expression

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[Homology]

Score

KWV95947.1

Penicillin-binding protein 2; Derived by automated computational analysis using gene prediction method: Protein Homology. (693 aa)

Predicted Functional Partners:

mrdB

0.996

KWV95949.1

0.986

KWV95950.1

0.977

ftsQ

0.951

KWV93663.1

0.947

KWV95391.1

0.945

KWV96108.1

0.938

KWV94383.1

0.936

KWV96057.1

0.926

KWV96358.1

0.894

Your Current Organism:

Erythrobacter sp. AP23

NCBI taxonomy Id: 499656
Other names: E. sp. AP23

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... as short tabular text output:

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TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

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TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

... network coordinates:

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
KWV93663.1	KWV94383.1	ASS64_12225	ASS64_11300	Penicillin-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Penicillin-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.863
KWV93663.1	KWV95391.1	ASS64_12225	ASS64_05200	Penicillin-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Cell division protein FtsW; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the SEDS family.	0.799
KWV93663.1	KWV95947.1	ASS64_12225	ASS64_01635	Penicillin-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Penicillin-binding protein 2; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.947
KWV93663.1	KWV95949.1	ASS64_12225	ASS64_01645	Penicillin-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Rod shape-determining protein MreC; Involved in formation and maintenance of cell shape.	0.485
KWV93663.1	KWV96108.1	ASS64_12225	ASS64_02515	Penicillin-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Penicillin-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.903
KWV93663.1	mrdB	ASS64_12225	ASS64_01630	Penicillin-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Rod shape-determining protein RodA; Peptidoglycan polymerase that is essential for cell wall elongation; Belongs to the SEDS family. MrdB/RodA subfamily.	0.782
KWV94383.1	KWV93663.1	ASS64_11300	ASS64_12225	Penicillin-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Penicillin-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.863
KWV94383.1	KWV95391.1	ASS64_11300	ASS64_05200	Penicillin-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Cell division protein FtsW; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the SEDS family.	0.744
KWV94383.1	KWV95947.1	ASS64_11300	ASS64_01635	Penicillin-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Penicillin-binding protein 2; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.936
KWV94383.1	KWV95949.1	ASS64_11300	ASS64_01645	Penicillin-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Rod shape-determining protein MreC; Involved in formation and maintenance of cell shape.	0.440
KWV94383.1	KWV96108.1	ASS64_11300	ASS64_02515	Penicillin-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Penicillin-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.905
KWV94383.1	mrdB	ASS64_11300	ASS64_01630	Penicillin-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Rod shape-determining protein RodA; Peptidoglycan polymerase that is essential for cell wall elongation; Belongs to the SEDS family. MrdB/RodA subfamily.	0.730
KWV95391.1	KWV93663.1	ASS64_05200	ASS64_12225	Cell division protein FtsW; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the SEDS family.	Penicillin-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.799
KWV95391.1	KWV94383.1	ASS64_05200	ASS64_11300	Cell division protein FtsW; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the SEDS family.	Penicillin-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.744
KWV95391.1	KWV95947.1	ASS64_05200	ASS64_01635	Cell division protein FtsW; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the SEDS family.	Penicillin-binding protein 2; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.945
KWV95391.1	KWV95949.1	ASS64_05200	ASS64_01645	Cell division protein FtsW; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the SEDS family.	Rod shape-determining protein MreC; Involved in formation and maintenance of cell shape.	0.430
KWV95391.1	KWV95950.1	ASS64_05200	ASS64_01650	Cell division protein FtsW; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the SEDS family.	Rod shape-determining protein MreB; Functions in MreBCD complex in some organisms; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.476
KWV95391.1	KWV96057.1	ASS64_05200	ASS64_02210	Cell division protein FtsW; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the SEDS family.	Septum formation initiator; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.918
KWV95391.1	KWV96108.1	ASS64_05200	ASS64_02515	Cell division protein FtsW; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the SEDS family.	Penicillin-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.830
KWV95391.1	ftsQ	ASS64_05200	ASS64_05175	Cell division protein FtsW; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the SEDS family.	Cell division protein FtsQ; Essential cell division protein; Belongs to the FtsQ/DivIB family. FtsQ subfamily.	0.996