STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KWV96466.1Capsular biosynthesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (322 aa)    
Predicted Functional Partners:
KWV96124.1
Chain-length determining protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.963
KWV96119.1
Glycosyl transferase family 1; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.962
KWV96125.1
Polysaccharide export protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.960
KWV96121.1
Polysaccharide deacetylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.958
KWV96118.1
Exosortase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.951
KWV96120.1
FemAB; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.946
KWV96122.1
General secretion pathway protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.946
KWV96117.1
Asparagine synthetase B; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.923
KWV96123.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.898
KWV94515.1
UDP-phosphate galactose phosphotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.880
Your Current Organism:
Erythrobacter sp. AP23
NCBI taxonomy Id: 499656
Other names: E. sp. AP23
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.