Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
KWV96124.1Chain-length determining protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (505 aa)    
Predicted Functional Partners:
KWV96125.1
Polysaccharide export protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.992
KWV96466.1
Capsular biosynthesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.967
KWV96119.1
Glycosyl transferase family 1; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
  0.927
KWV96121.1
Polysaccharide deacetylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.922
KWV96279.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.922
KWV96122.1
General secretion pathway protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.916
KWV96118.1
Exosortase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.915
KWV96120.1
FemAB; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.906
KWV96117.1
Asparagine synthetase B; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.896
KWV96129.1
Esterase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.857
Your Current Organism:
Erythrobacter sp. AP23
NCBI taxonomy Id: 499656
Other names: E. sp. AP23
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