STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KWV96127.1AMP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (504 aa)    
Predicted Functional Partners:
KWV96126.1
Diaminopimelate decarboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the Orn/Lys/Arg decarboxylase class-II family.
 
    0.961
KWV93635.1
acyl-CoA synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.942
KWV96468.1
Acyl carrier protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  0.931
KWV96129.1
Esterase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.861
KWV96467.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.795
KWV94138.1
3-hydroxyacyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the enoyl-CoA hydratase/isomerase family.
  
 0.795
KWV96124.1
Chain-length determining protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.792
KWV96118.1
Exosortase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.763
KWV96125.1
Polysaccharide export protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.754
KWV93779.1
Serine/threonine protein kinase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
   
 0.750
Your Current Organism:
Erythrobacter sp. AP23
NCBI taxonomy Id: 499656
Other names: E. sp. AP23
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.