Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
KWV96157.1Metal-dependent hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (313 aa)    
Predicted Functional Partners:
KWV95137.1
RNA polymerase subunit sigma; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.705
KWV94681.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.699
KWV94678.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.668
KWV96156.1
Deoxyribodipyrimidine photolyase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the DNA photolyase family.
       0.655
KWV95659.1
Phosphoribosylglycinamide synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.653
KWV94736.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.650
KWV94708.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.625
KWV96111.1
Phosphoribosylglycinamide synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.618
KWV94679.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.615
KWV94497.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.614
Your Current Organism:
Erythrobacter sp. AP23
NCBI taxonomy Id: 499656
Other names: E. sp. AP23
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