Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
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[Homology]
Score
KWV96261.1MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (577 aa)    
Predicted Functional Partners:
KWV96263.1
Pseudouridine synthase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the pseudouridine synthase RsuA family.
       0.689
KWV96264.1
16S rRNA (guanine(966)-N(2))-methyltransferase RsmD; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.689
KWV96262.1
Ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.678
KWV93725.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.636
KWV96260.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.586
KWV92604.1
N-acetylmuramoyl-L-alanine amidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.562
KWV94135.1
Multidrug transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  0.560
KWV94134.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  0.558
KWV93797.1
Multidrug ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  0.558
KWV95004.1
Aminobenzoate synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.527
Your Current Organism:
Erythrobacter sp. AP23
NCBI taxonomy Id: 499656
Other names: E. sp. AP23
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