Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
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Co-occurrence
Co-expression
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[Homology]
Score
KWV96265.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (146 aa)    
Predicted Functional Partners:
KWV95994.1
SCP-like extracellular; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
  0.702
KWV94540.1
Cell envelope biogenesis protein OmpA; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.668
KWV95335.1
Alpha-amylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.644
KWV93998.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.644
KWV93880.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.644
nadE
NAD synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source.
   
  0.597
KWV92464.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.594
KWV94533.1
Arylesterase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.589
KWV94321.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.589
KWV96267.1
DNA helicase II; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.478
Your Current Organism:
Erythrobacter sp. AP23
NCBI taxonomy Id: 499656
Other names: E. sp. AP23
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