KWV96276.1 protein (Erythrobacter sp. AP23) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

KWV96276.1

Response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (130 aa)

Predicted Functional Partners:

KWV92567.1

0.948

KWV94095.1

0.944

KWV95601.1

0.900

KWV94008.1

0.896

KWV95762.1

0.848

KWV94171.1

0.821

KWV93746.1

0.791

KWV95346.1

0.789

KWV92481.1

0.780

KWV94130.1

0.776

Your Current Organism:

Erythrobacter sp. AP23

NCBI taxonomy Id: 499656
Other names: E. sp. AP23

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
KWV92481.1	KWV92567.1	ASS64_14615	ASS64_15090	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Histidine phosphotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.705
KWV92481.1	KWV93746.1	ASS64_14615	ASS64_12680	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	PAS domain-containing sensor histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.976
KWV92481.1	KWV94008.1	ASS64_14615	ASS64_09110	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.983
KWV92481.1	KWV94130.1	ASS64_14615	ASS64_09845	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.949
KWV92481.1	KWV94171.1	ASS64_14615	ASS64_10080	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Two-component system sensor protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.899
KWV92481.1	KWV95346.1	ASS64_14615	ASS64_04935	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.815
KWV92481.1	KWV95601.1	ASS64_14615	ASS64_15605	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Chemotaxis protein CheA; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.982
KWV92481.1	KWV95762.1	ASS64_14615	ASS64_00515	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hybrid sensor histidine kinase/response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.984
KWV92481.1	KWV96276.1	ASS64_14615	ASS64_03455	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.780
KWV92567.1	KWV92481.1	ASS64_15090	ASS64_14615	Histidine phosphotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.705
KWV92567.1	KWV93746.1	ASS64_15090	ASS64_12680	Histidine phosphotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	PAS domain-containing sensor histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.709
KWV92567.1	KWV94008.1	ASS64_15090	ASS64_09110	Histidine phosphotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.937
KWV92567.1	KWV94130.1	ASS64_15090	ASS64_09845	Histidine phosphotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.721
KWV92567.1	KWV94171.1	ASS64_15090	ASS64_10080	Histidine phosphotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Two-component system sensor protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.667
KWV92567.1	KWV95346.1	ASS64_15090	ASS64_04935	Histidine phosphotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.720
KWV92567.1	KWV95601.1	ASS64_15090	ASS64_15605	Histidine phosphotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Chemotaxis protein CheA; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.557
KWV92567.1	KWV95762.1	ASS64_15090	ASS64_00515	Histidine phosphotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hybrid sensor histidine kinase/response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.990
KWV92567.1	KWV96276.1	ASS64_15090	ASS64_03455	Histidine phosphotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.948
KWV93746.1	KWV92481.1	ASS64_12680	ASS64_14615	PAS domain-containing sensor histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.976
KWV93746.1	KWV92567.1	ASS64_12680	ASS64_15090	PAS domain-containing sensor histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Histidine phosphotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.709