Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
KWV95263.1Glucoamylase; Derived by automated computational analysis using gene prediction method: Protein Homology. (595 aa)    
Predicted Functional Partners:
KWV95465.1
Alpha,alpha-trehalose-phosphate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.988
KWV95264.1
Hypothetical protein; Removes the phosphate from trehalose 6-phosphate to produce free trehalose.
 
  
 0.985
glk
Glucokinase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial glucokinase family.
 
  
 0.743
KWV95265.1
Peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.698
KWV94659.1
Alpha-amlyase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.646
KWV94663.1
Alpha-amylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.630
KWV94664.1
Alpha-glucosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.630
KWV95262.1
Protein tyrosine phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.624
KWV95727.1
UDP pyrophosphate synthase; Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids.
     
  0.590
KWV95690.1
Farnesyltranstransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the FPP/GGPP synthase family.
     
  0.559
Your Current Organism:
Erythrobacter sp. AP23
NCBI taxonomy Id: 499656
Other names: E. sp. AP23
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