Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ASS64_05705Phage-tail_3 domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (729 aa)    
Predicted Functional Partners:
KWV95219.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
   0.952
KWV95218.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
   0.946
KWV94971.1
Glutamate synthase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.929
KWV95221.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
  0.915
KWV95216.1
Phage tail protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
   0.885
KWV95213.1
Phage capsid protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
   0.849
KWV95210.1
Portal protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
   0.847
KWV94095.1
Flagellar motor switch protein FliN; FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation. Belongs to the FliN/MopA/SpaO family.
   
   0.832
KWV95217.1
Tail tape measure protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.784
KWV95208.1
ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.769
Your Current Organism:
Erythrobacter sp. AP23
NCBI taxonomy Id: 499656
Other names: E. sp. AP23
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