Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
KWV95180.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (99 aa)    
Predicted Functional Partners:
KWV95142.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0276 family.
 
  
 0.935
KWV95143.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.892
KWV95139.1
DoxX protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.850
KWV94162.1
Type VI secretion protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.642
KWV94681.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.614
KWV93749.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.533
KWV94949.1
UTP--glucose-1-phosphate uridylyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.493
ASS64_05705
Phage-tail_3 domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.437
KWV95141.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.421
KWV94887.1
Tat pathway signal protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.406
Your Current Organism:
Erythrobacter sp. AP23
NCBI taxonomy Id: 499656
Other names: E. sp. AP23
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