KWV94993.1 protein (Erythrobacter sp. AP23) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

KWV94993.1

Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (328 aa)

Predicted Functional Partners:

KWV94975.1

0.769

KWV94420.1

0.767

KWV96467.1

0.764

KWV95437.1

0.757

KWV96468.1

0.752

KWV94540.1

0.752

KWV96402.1

0.745

KWV95460.1

0.739

KWV96129.1

0.736

KWV95384.1

0.731

Your Current Organism:

Erythrobacter sp. AP23

NCBI taxonomy Id: 499656
Other names: E. sp. AP23

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
KWV94420.1	KWV94540.1	ASS64_11520	ASS64_10960	protein-S-isoprenylcysteine methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Cell envelope biogenesis protein OmpA; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.456
KWV94420.1	KWV94975.1	ASS64_11520	ASS64_07230	protein-S-isoprenylcysteine methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Polymerase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.640
KWV94420.1	KWV94993.1	ASS64_11520	ASS64_07335	protein-S-isoprenylcysteine methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.767
KWV94420.1	KWV95384.1	ASS64_11520	ASS64_05160	protein-S-isoprenylcysteine methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.755
KWV94420.1	KWV95437.1	ASS64_11520	ASS64_05455	protein-S-isoprenylcysteine methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Pilus assembly protein CpaD; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.766
KWV94420.1	KWV95460.1	ASS64_11520	ASS64_05570	protein-S-isoprenylcysteine methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.712
KWV94420.1	KWV96402.1	ASS64_11520	ASS64_04165	protein-S-isoprenylcysteine methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.708
KWV94420.1	KWV96467.1	ASS64_11520	ASS64_02625	protein-S-isoprenylcysteine methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.693
KWV94540.1	KWV94420.1	ASS64_10960	ASS64_11520	Cell envelope biogenesis protein OmpA; Derived by automated computational analysis using gene prediction method: Protein Homology.	protein-S-isoprenylcysteine methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.456
KWV94540.1	KWV94993.1	ASS64_10960	ASS64_07335	Cell envelope biogenesis protein OmpA; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.752
KWV94975.1	KWV94420.1	ASS64_07230	ASS64_11520	Polymerase; Derived by automated computational analysis using gene prediction method: Protein Homology.	protein-S-isoprenylcysteine methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.640
KWV94975.1	KWV94993.1	ASS64_07230	ASS64_07335	Polymerase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.769
KWV94975.1	KWV95437.1	ASS64_07230	ASS64_05455	Polymerase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Pilus assembly protein CpaD; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.732
KWV94975.1	KWV95460.1	ASS64_07230	ASS64_05570	Polymerase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.542
KWV94975.1	KWV96129.1	ASS64_07230	ASS64_02640	Polymerase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Esterase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.770
KWV94975.1	KWV96402.1	ASS64_07230	ASS64_04165	Polymerase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.715
KWV94975.1	KWV96467.1	ASS64_07230	ASS64_02625	Polymerase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.754
KWV94975.1	KWV96468.1	ASS64_07230	ASS64_02630	Polymerase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Acyl carrier protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.773
KWV94993.1	KWV94420.1	ASS64_07335	ASS64_11520	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	protein-S-isoprenylcysteine methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.767
KWV94993.1	KWV94540.1	ASS64_07335	ASS64_10960	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Cell envelope biogenesis protein OmpA; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.752