KWV95022.1 protein (Erythrobacter sp. AP23) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

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textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

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[Homology]

Score

KWV95022.1

ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (511 aa)

Predicted Functional Partners:

KWV95023.1

0.999

KWV95555.1

0.876

KWV95869.1

0.871

KWV95684.1

0.867

KWV94441.1

0.867

KWV93793.1

0.867

KWV95904.1

0.866

KWV94526.1

0.866

KWV92583.1

0.866

KWV93764.1

0.864

Your Current Organism:

Erythrobacter sp. AP23

NCBI taxonomy Id: 499656
Other names: E. sp. AP23

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
KWV92583.1	KWV93764.1	ASS64_15195	ASS64_12780	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	LPS export ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.917
KWV92583.1	KWV93793.1	ASS64_15195	ASS64_12935	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.675
KWV92583.1	KWV94441.1	ASS64_15195	ASS64_11640	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.675
KWV92583.1	KWV94526.1	ASS64_15195	ASS64_10365	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Multidrug ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.872
KWV92583.1	KWV95022.1	ASS64_15195	ASS64_07495	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.866
KWV92583.1	KWV95023.1	ASS64_15195	ASS64_07500	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.433
KWV92583.1	KWV95555.1	ASS64_15195	ASS64_15955	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Peptide ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.842
KWV92583.1	KWV95684.1	ASS64_15195	ASS64_00050	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Elongation factor 3; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.718
KWV92583.1	KWV95869.1	ASS64_15195	ASS64_01165	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Phosphate ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.824
KWV92583.1	KWV95904.1	ASS64_15195	ASS64_01365	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.872
KWV93764.1	KWV92583.1	ASS64_12780	ASS64_15195	LPS export ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.917
KWV93764.1	KWV93793.1	ASS64_12780	ASS64_12935	LPS export ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.603
KWV93764.1	KWV94441.1	ASS64_12780	ASS64_11640	LPS export ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.603
KWV93764.1	KWV94526.1	ASS64_12780	ASS64_10365	LPS export ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Multidrug ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.850
KWV93764.1	KWV95022.1	ASS64_12780	ASS64_07495	LPS export ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.864
KWV93764.1	KWV95023.1	ASS64_12780	ASS64_07500	LPS export ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.681
KWV93764.1	KWV95555.1	ASS64_12780	ASS64_15955	LPS export ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Peptide ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.801
KWV93764.1	KWV95684.1	ASS64_12780	ASS64_00050	LPS export ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Elongation factor 3; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.603
KWV93764.1	KWV95869.1	ASS64_12780	ASS64_01165	LPS export ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Phosphate ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.763
KWV93764.1	KWV95904.1	ASS64_12780	ASS64_01365	LPS export ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.850