Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
KWV95065.1ATP-dependent protease; Derived by automated computational analysis using gene prediction method: Protein Homology. (203 aa)    
Predicted Functional Partners:
KWV95066.1
Co-chaperone YbbN; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.873
groEL
Molecular chaperone GroEL; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions.
    
 0.769
KWV94814.1
ATP-dependent DNA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
  0.699
acpP
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
    
  0.548
KWV96468.1
Acyl carrier protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.548
KWV95200.1
Phosphopantetheine-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.548
KWV94637.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.548
KWV95855.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.545
KWV96048.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
  0.510
KWV96147.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
  0.510
Your Current Organism:
Erythrobacter sp. AP23
NCBI taxonomy Id: 499656
Other names: E. sp. AP23
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