STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KWV94611.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (142 aa)    
Predicted Functional Partners:
KWV94696.1
Hydrogenase expression protein HupH; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.781
KWV94610.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
      
0.773
KWV94612.1
TonB-dependent receptor; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.572
KWV94971.1
Glutamate synthase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.441
KWV94613.1
GntR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.412
KWV94614.1
3-hydroxy-3-methylglutaryl-CoA lyase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.412
KWV94615.1
5-oxoprolinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.412
KWV94618.1
Isochorismatase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.406
KWV94616.1
5-oxoprolinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.403
KWV94617.1
CoA-transferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the CoA-transferase III family.
       0.403
Your Current Organism:
Erythrobacter sp. AP23
NCBI taxonomy Id: 499656
Other names: E. sp. AP23
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