Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
KWV94704.1Tryptophan halogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (498 aa)    
Predicted Functional Partners:
KWV94665.1
Alpha-glucosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.916
KWV94666.1
Tryptophan halogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 
0.900
KWV94663.1
Alpha-amylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.878
KWV94662.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.877
KWV94664.1
Alpha-glucosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.842
KWV94703.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
  0.835
KWV94065.1
RpsU-divergently transcribed; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.789
KWV94148.1
TonB-dependent receptor; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.771
coq7
Ubiquinone biosynthesis protein UbiB; Catalyzes the hydroxylation of 2-nonaprenyl-3-methyl-6- methoxy-1,4-benzoquinol during ubiquinone biosynthesis.
   
 0.760
KWV94149.1
Tryptophan halogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
  0.759
Your Current Organism:
Erythrobacter sp. AP23
NCBI taxonomy Id: 499656
Other names: E. sp. AP23
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