KWV94493.1 protein (Erythrobacter sp. AP23) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

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Textmining

[Homology]

Score

KWV94493.1

LPS export ABC transporter permease LptF; Derived by automated computational analysis using gene prediction method: Protein Homology. (387 aa)

Predicted Functional Partners:

KWV93991.1

0.999

KWV93953.1

0.990

KWV93764.1

0.971

lptD

0.892

KWV93990.1

0.803

KWV94961.1

0.775

KWV93993.1

0.668

KWV95200.1

0.667

KWV92585.1

0.667

KWV94301.1

0.621

Your Current Organism:

Erythrobacter sp. AP23

NCBI taxonomy Id: 499656
Other names: E. sp. AP23

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
KWV92585.1	KWV93991.1	ASS64_15210	ASS64_08980	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	LPS export ABC transporter permease LptG; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.555
KWV92585.1	KWV94301.1	ASS64_15210	ASS64_10835	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.740
KWV92585.1	KWV94493.1	ASS64_15210	ASS64_08985	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	LPS export ABC transporter permease LptF; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.667
KWV92585.1	KWV94961.1	ASS64_15210	ASS64_07160	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	OstA family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.449
KWV92585.1	KWV95200.1	ASS64_15210	ASS64_05590	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	Phosphopantetheine-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.693
KWV92585.1	lptD	ASS64_15210	ASS64_10785	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	Organic solvent tolerance protein; Involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane; Belongs to the LptD family.	0.636
KWV93764.1	KWV93953.1	ASS64_12780	ASS64_13805	LPS export ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	LPS export ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.768
KWV93764.1	KWV93991.1	ASS64_12780	ASS64_08980	LPS export ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	LPS export ABC transporter permease LptG; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.991
KWV93764.1	KWV94493.1	ASS64_12780	ASS64_08985	LPS export ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	LPS export ABC transporter permease LptF; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.971
KWV93764.1	KWV94961.1	ASS64_12780	ASS64_07160	LPS export ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	OstA family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.889
KWV93764.1	lptD	ASS64_12780	ASS64_10785	LPS export ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Organic solvent tolerance protein; Involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane; Belongs to the LptD family.	0.623
KWV93953.1	KWV93764.1	ASS64_13805	ASS64_12780	LPS export ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	LPS export ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.768
KWV93953.1	KWV93991.1	ASS64_13805	ASS64_08980	LPS export ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	LPS export ABC transporter permease LptG; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.997
KWV93953.1	KWV94493.1	ASS64_13805	ASS64_08985	LPS export ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	LPS export ABC transporter permease LptF; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.990
KWV93953.1	KWV94961.1	ASS64_13805	ASS64_07160	LPS export ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	OstA family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.889
KWV93953.1	lptD	ASS64_13805	ASS64_10785	LPS export ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Organic solvent tolerance protein; Involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane; Belongs to the LptD family.	0.667
KWV93990.1	KWV93991.1	ASS64_08975	ASS64_08980	Acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	LPS export ABC transporter permease LptG; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.817
KWV93990.1	KWV94493.1	ASS64_08975	ASS64_08985	Acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	LPS export ABC transporter permease LptF; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.803
KWV93991.1	KWV92585.1	ASS64_08980	ASS64_15210	LPS export ABC transporter permease LptG; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.555
KWV93991.1	KWV93764.1	ASS64_08980	ASS64_12780	LPS export ABC transporter permease LptG; Derived by automated computational analysis using gene prediction method: Protein Homology.	LPS export ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.991