Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
KWV94080.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (290 aa)    
Predicted Functional Partners:
KWV96415.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.659
KWV94515.1
UDP-phosphate galactose phosphotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.604
thrS
threonine--tRNA ligase; Catalyzes the attachment of threonine to tRNA(Thr) in a two- step reaction: L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr).
   
 
  0.540
KWV95590.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.539
KWV94079.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.538
KWV96121.1
Polysaccharide deacetylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.503
KWV95855.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.487
KWV96273.1
Mannose-1-phosphate guanylyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.486
KWV94078.1
Metal ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.445
KWV96119.1
Glycosyl transferase family 1; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
  0.435
Your Current Organism:
Erythrobacter sp. AP23
NCBI taxonomy Id: 499656
Other names: E. sp. AP23
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