KWV94103.1 protein (Erythrobacter sp. AP23) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

KWV94103.1

Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (198 aa)

Predicted Functional Partners:

KWV95762.1

0.885

KWV94008.1

0.863

KWV93746.1

0.828

KWV93522.1

0.779

KWV92479.1

0.779

KWV95876.1

0.778

KWV94646.1

0.771

KWV96318.1

0.762

KWV94837.1

0.750

KWV95187.1

0.750

Your Current Organism:

Erythrobacter sp. AP23

NCBI taxonomy Id: 499656
Other names: E. sp. AP23

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
KWV92479.1	KWV93522.1	ASS64_14605	ASS64_13855	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.675
KWV92479.1	KWV93746.1	ASS64_14605	ASS64_12680	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	PAS domain-containing sensor histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.623
KWV92479.1	KWV94008.1	ASS64_14605	ASS64_09110	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.775
KWV92479.1	KWV94103.1	ASS64_14605	ASS64_09675	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.779
KWV92479.1	KWV94837.1	ASS64_14605	ASS64_06430	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.675
KWV92479.1	KWV95187.1	ASS64_14605	ASS64_07510	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	PAS domain S-box protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.675
KWV92479.1	KWV95762.1	ASS64_14605	ASS64_00515	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hybrid sensor histidine kinase/response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.703
KWV92479.1	KWV96318.1	ASS64_14605	ASS64_03675	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hybrid sensor histidine kinase/response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.577
KWV93522.1	KWV92479.1	ASS64_13855	ASS64_14605	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.675
KWV93522.1	KWV93746.1	ASS64_13855	ASS64_12680	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	PAS domain-containing sensor histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.909
KWV93522.1	KWV94008.1	ASS64_13855	ASS64_09110	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.998
KWV93522.1	KWV94103.1	ASS64_13855	ASS64_09675	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.779
KWV93522.1	KWV94646.1	ASS64_13855	ASS64_08685	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.713
KWV93522.1	KWV94837.1	ASS64_13855	ASS64_06430	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.923
KWV93522.1	KWV95187.1	ASS64_13855	ASS64_07510	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	PAS domain S-box protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.908
KWV93522.1	KWV95762.1	ASS64_13855	ASS64_00515	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hybrid sensor histidine kinase/response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.998
KWV93522.1	KWV95876.1	ASS64_13855	ASS64_01220	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.976
KWV93522.1	KWV96318.1	ASS64_13855	ASS64_03675	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hybrid sensor histidine kinase/response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.985
KWV93746.1	KWV92479.1	ASS64_12680	ASS64_14605	PAS domain-containing sensor histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.623
KWV93746.1	KWV93522.1	ASS64_12680	ASS64_13855	PAS domain-containing sensor histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.909