Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
KWV94436.1Acylphosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology. (88 aa)    
Predicted Functional Partners:
KWV95540.1
Malic enzyme; NADP-dependent; catalyzes the oxidative decarboxylation of malate to form pyruvate; decarboxylates oxaloacetate; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.869
KWV96359.1
Amidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.708
KWV92529.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.708
KWV96463.1
Aldehyde dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the aldehyde dehydrogenase family.
     
  0.699
KWV96234.1
Carbon-nitrogen hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
  0.699
KWV93973.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
  0.661
KWV94437.1
Peptidylprolyl isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.620
KWV93653.1
N-carbamoylputrescine amidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
  0.569
KWV93750.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
  0.569
KWV96064.1
Nitrilase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
  0.560
Your Current Organism:
Erythrobacter sp. AP23
NCBI taxonomy Id: 499656
Other names: E. sp. AP23
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