STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KWV93623.1RNA polymerase subunit sigma-70; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sigma-70 factor family. ECF subfamily. (201 aa)    
Predicted Functional Partners:
KWV93624.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.802
KWV93622.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.773
KWV93621.1
Two-component response regulator; In Caulobacter crescentus, CC3477 is differentially expressed in minimal salts media with glucose as compared to complex media; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.741
KWV93959.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.719
KWV95367.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sigma-70 factor family. ECF subfamily.
  
     0.695
KWV93570.1
RNA polymerase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sigma-70 factor family. ECF subfamily.
  
     0.666
KWV92563.1
RNA polymerase subunit sigma; Bacteria have multiple sigma factors which are active under specific conditions; the sigma factor binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sigma-70 factor family. ECF subfamily.
  
     0.609
KWV93523.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.534
KWV93940.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.501
KWV94458.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   0.497
Your Current Organism:
Erythrobacter sp. AP23
NCBI taxonomy Id: 499656
Other names: E. sp. AP23
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.