Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
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Co-occurrence
Co-expression
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[Homology]
Score
KWV93520.1phytanoyl-CoA dioxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (288 aa)    
Predicted Functional Partners:
KWV93521.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.921
KWV93519.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.827
KWV95009.1
Cupin; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.599
KWV93972.1
Monooxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   
 0.583
KWV93802.1
Cyclopentanone 1,2-monooxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   
 0.574
KWV95184.1
X-Pro aminopeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.563
KWV93522.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.542
KWV96273.1
Mannose-1-phosphate guanylyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.537
KWV94898.1
Phosphohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.521
KWV92598.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.489
Your Current Organism:
Erythrobacter sp. AP23
NCBI taxonomy Id: 499656
Other names: E. sp. AP23
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