KWV93559.1 protein (Erythrobacter sp. AP23) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

Node Content

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

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Gene Fusion

Cooccurrence

Coexpression

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[Homology]

Score

KWV93559.1

RepA replication protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (293 aa)

Predicted Functional Partners:

KWV93560.1

0.951

KWV93612.1

0.879

KWV93558.1

0.876

KWV93557.1

0.859

KWV93555.1

0.799

KWV93551.1

0.774

KWV93608.1

0.755

KWV93542.1

0.750

KWV93539.1

0.742

KWV93543.1

0.736

Your Current Organism:

Erythrobacter sp. AP23

NCBI taxonomy Id: 499656
Other names: E. sp. AP23

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
KWV93539.1	KWV93542.1	ASS64_13940	ASS64_13960	Conjugal transfer protein TrbL; Derived by automated computational analysis using gene prediction method: Protein Homology.	Conjugal transfer protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.967
KWV93539.1	KWV93543.1	ASS64_13940	ASS64_13965	Conjugal transfer protein TrbL; Derived by automated computational analysis using gene prediction method: Protein Homology.	Conjugal transfer protein TrbC; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.967
KWV93539.1	KWV93551.1	ASS64_13940	ASS64_14015	Conjugal transfer protein TrbL; Derived by automated computational analysis using gene prediction method: Protein Homology.	CopG family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.802
KWV93539.1	KWV93555.1	ASS64_13940	ASS64_14035	Conjugal transfer protein TrbL; Derived by automated computational analysis using gene prediction method: Protein Homology.	Type VI secretion protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.799
KWV93539.1	KWV93557.1	ASS64_13940	ASS64_14050	Conjugal transfer protein TrbL; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.778
KWV93539.1	KWV93558.1	ASS64_13940	ASS64_14055	Conjugal transfer protein TrbL; Derived by automated computational analysis using gene prediction method: Protein Homology.	S26 family signal peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.805
KWV93539.1	KWV93559.1	ASS64_13940	ASS64_14065	Conjugal transfer protein TrbL; Derived by automated computational analysis using gene prediction method: Protein Homology.	RepA replication protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.742
KWV93539.1	KWV93560.1	ASS64_13940	ASS64_14070	Conjugal transfer protein TrbL; Derived by automated computational analysis using gene prediction method: Protein Homology.	Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.770
KWV93539.1	KWV93608.1	ASS64_13940	ASS64_13950	Conjugal transfer protein TrbL; Derived by automated computational analysis using gene prediction method: Protein Homology.	Conjugal transfer protein TrbJ; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.978
KWV93539.1	KWV93612.1	ASS64_13940	ASS64_14060	Conjugal transfer protein TrbL; Derived by automated computational analysis using gene prediction method: Protein Homology.	Glycosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.773
KWV93542.1	KWV93539.1	ASS64_13960	ASS64_13940	Conjugal transfer protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Conjugal transfer protein TrbL; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.967
KWV93542.1	KWV93543.1	ASS64_13960	ASS64_13965	Conjugal transfer protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Conjugal transfer protein TrbC; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.979
KWV93542.1	KWV93551.1	ASS64_13960	ASS64_14015	Conjugal transfer protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	CopG family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.803
KWV93542.1	KWV93555.1	ASS64_13960	ASS64_14035	Conjugal transfer protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Type VI secretion protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.792
KWV93542.1	KWV93557.1	ASS64_13960	ASS64_14050	Conjugal transfer protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.779
KWV93542.1	KWV93558.1	ASS64_13960	ASS64_14055	Conjugal transfer protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	S26 family signal peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.787
KWV93542.1	KWV93559.1	ASS64_13960	ASS64_14065	Conjugal transfer protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	RepA replication protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.750
KWV93542.1	KWV93560.1	ASS64_13960	ASS64_14070	Conjugal transfer protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.770
KWV93542.1	KWV93608.1	ASS64_13960	ASS64_13950	Conjugal transfer protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Conjugal transfer protein TrbJ; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.968
KWV93542.1	KWV93612.1	ASS64_13960	ASS64_14060	Conjugal transfer protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Glycosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.773