Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
KWV93571.1Heavy metal resistance protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (144 aa)    
Predicted Functional Partners:
KWV93570.1
RNA polymerase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sigma-70 factor family. ECF subfamily.
 
     0.902
KWV93613.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.868
KWV93572.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.854
KWV93573.1
Methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.828
KWV93566.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.795
KWV93567.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.760
KWV95648.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.730
KWV93568.1
Copper resistance protein CopB; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.728
KWV93980.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.727
ASS64_15850
Virulence protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.717
Your Current Organism:
Erythrobacter sp. AP23
NCBI taxonomy Id: 499656
Other names: E. sp. AP23
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