Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
KWV92464.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (1462 aa)    
Predicted Functional Partners:
KWV93689.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  0.861
KWV95156.1
Peptidase S41; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase S41A family.
   
  0.840
KWV93721.1
Peptidase S41; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  0.840
KWV94540.1
Cell envelope biogenesis protein OmpA; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.827
KWV94160.1
Transglycosylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.824
KWV95457.1
ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 
 0.813
KWV95015.1
Cell division protein FtsK; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 
 0.813
KWV92463.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.812
KWV94520.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
  0.806
KWV94122.1
Polysaccharide biosynthesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.803
Your Current Organism:
Erythrobacter sp. AP23
NCBI taxonomy Id: 499656
Other names: E. sp. AP23
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