KWV92562.1 protein (Erythrobacter sp. AP23) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

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[Homology]

Score

KWV92562.1

Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (239 aa)

Predicted Functional Partners:

KWV92563.1

0.965

KWV92564.1

0.815

KWV92561.1

0.621

KWV94247.1

0.486

KWV94685.1

0.479

KWV95495.1

0.444

KWV95657.1

0.440

KWV93623.1

0.434

KWV95138.1

0.414

KWV93570.1

0.410

Your Current Organism:

Erythrobacter sp. AP23

NCBI taxonomy Id: 499656
Other names: E. sp. AP23

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structured XML interaction data, according to the 'PSI-MI' data standard

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MFA: multi-fasta format - containing the aminoacid sequences in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
KWV92561.1	KWV92562.1	ASS64_15045	ASS64_15050	beta-Ig-H3/fasciclin; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.621
KWV92561.1	KWV92563.1	ASS64_15045	ASS64_15055	beta-Ig-H3/fasciclin; Derived by automated computational analysis using gene prediction method: Protein Homology.	RNA polymerase subunit sigma; Bacteria have multiple sigma factors which are active under specific conditions; the sigma factor binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sigma-70 factor family. ECF subfamily.	0.682
KWV92561.1	KWV92564.1	ASS64_15045	ASS64_15060	beta-Ig-H3/fasciclin; Derived by automated computational analysis using gene prediction method: Protein Homology.	Cobalt transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.619
KWV92562.1	KWV92561.1	ASS64_15050	ASS64_15045	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	beta-Ig-H3/fasciclin; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.621
KWV92562.1	KWV92563.1	ASS64_15050	ASS64_15055	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	RNA polymerase subunit sigma; Bacteria have multiple sigma factors which are active under specific conditions; the sigma factor binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sigma-70 factor family. ECF subfamily.	0.965
KWV92562.1	KWV92564.1	ASS64_15050	ASS64_15060	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Cobalt transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.815
KWV92562.1	KWV93570.1	ASS64_15050	ASS64_14125	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	RNA polymerase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sigma-70 factor family. ECF subfamily.	0.410
KWV92562.1	KWV93623.1	ASS64_15050	ASS64_11985	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	RNA polymerase subunit sigma-70; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sigma-70 factor family. ECF subfamily.	0.434
KWV92562.1	KWV94247.1	ASS64_15050	ASS64_10525	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.486
KWV92562.1	KWV94685.1	ASS64_15050	ASS64_08930	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.479
KWV92562.1	KWV95138.1	ASS64_15050	ASS64_08145	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	RNA polymerase subunit sigma-24; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sigma-70 factor family. ECF subfamily.	0.414
KWV92562.1	KWV95495.1	ASS64_15050	ASS64_16205	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sigma-70 factor family. ECF subfamily.	0.444
KWV92562.1	KWV95657.1	ASS64_15050	ASS64_15405	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sigma-70 factor family. ECF subfamily.	0.440
KWV92563.1	KWV92561.1	ASS64_15055	ASS64_15045	RNA polymerase subunit sigma; Bacteria have multiple sigma factors which are active under specific conditions; the sigma factor binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sigma-70 factor family. ECF subfamily.	beta-Ig-H3/fasciclin; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.682
KWV92563.1	KWV92562.1	ASS64_15055	ASS64_15050	RNA polymerase subunit sigma; Bacteria have multiple sigma factors which are active under specific conditions; the sigma factor binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sigma-70 factor family. ECF subfamily.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.965
KWV92563.1	KWV92564.1	ASS64_15055	ASS64_15060	RNA polymerase subunit sigma; Bacteria have multiple sigma factors which are active under specific conditions; the sigma factor binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sigma-70 factor family. ECF subfamily.	Cobalt transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.815
KWV92563.1	KWV93623.1	ASS64_15055	ASS64_11985	RNA polymerase subunit sigma; Bacteria have multiple sigma factors which are active under specific conditions; the sigma factor binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sigma-70 factor family. ECF subfamily.	RNA polymerase subunit sigma-70; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sigma-70 factor family. ECF subfamily.	0.609
KWV92563.1	KWV95495.1	ASS64_15055	ASS64_16205	RNA polymerase subunit sigma; Bacteria have multiple sigma factors which are active under specific conditions; the sigma factor binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sigma-70 factor family. ECF subfamily.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sigma-70 factor family. ECF subfamily.	0.663
KWV92564.1	KWV92561.1	ASS64_15060	ASS64_15045	Cobalt transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	beta-Ig-H3/fasciclin; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.619
KWV92564.1	KWV92562.1	ASS64_15060	ASS64_15050	Cobalt transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.815